Stoye, Jens : rechercher sur Z-Library

Le plus grand référentiel d'articles scientifiques au monde. 70,000,000+ d'articles gratuitement.

Don't use scam websites

Livres
Articles (114)
Les plus populaires
Liste
- Liste
- Tableau

1

Updating benchtop sequencing performance comparison

Jünemann, Sebastian, Sedlazeck, Fritz Joachim, Prior, Karola, Albersmeier, Andreas, John, Uwe, Kalinowski, Jörn, Mellmann, Alexander, Goesmann, Alexander, von Haeseler, Arndt, Stoye, Jens, Harmsen, Da

Journal:

Nature Biotechnology

Année:

2013

Langue:

english

Fichier:

PDF, 367 KB

english, 2013

2

Bloom Filter Trie: an alignment-free and reference-free data structure for pan-genome storage

Holley, Guillaume, Wittler, Roland, Stoye, Jens

Journal:

Algorithms for Molecular Biology

Année:

2016

Langue:

english

Fichier:

PDF, 1.73 MB

english, 2016

3

Taxonomic composition and gene content of a methane-producing microbial community isolated from a biogas reactor

Lutz Krause, Naryttza N. Diaz, Robert A. Edwards, Karl-Heinz Gartemann, Holger Krömeke, Heiko Neuweger, Alfred Pühler, Kai J. Runte, Andreas Schlüter, Jens Stoye, Rafael Szczepanowski, Andreas Tauch,

Journal:

Journal of Biotechnology

Année:

2008

Langue:

english

Fichier:

PDF, 640 KB

english, 2008

4

Linear time algorithms for finding and representing all the tandem repeats in a string

Dan Gusfield, Jens Stoye

Journal:

Journal of Computer and System Sciences

Année:

2004

Langue:

english

Fichier:

PDF, 313 KB

english, 2004

5

Combining peak- and chromatogram-based retention time alignment algorithms for multiple chromatography-mass spectrometry datasets

Nils Hoffmann, Matthias Keck, Heiko Neuweger, Mathias Wilhelm, Petra Högy, Karsten Niehaus, Jens Stoye

Journal:

BMC Bioinformatics

Année:

2012

Langue:

english

Fichier:

PDF, 1.63 MB

english, 2012

6

Bacterial Community Shift in Treated Periodontitis Patients Revealed by Ion Torrent 16S rRNA Gene Amplicon Sequencing

Jünemann, Sebastian, Prior, Karola, Szczepanowski, Rafael, Harks, Inga, Ehmke, Benjamin, Goesmann, Alexander, Stoye, Jens, Harmsen, Dag, Ahmed, Niyaz

Journal:

Année:

2012

Langue:

english

Fichier:

PDF, 282 KB

english, 2012

7

Early gradual feeding with bovine colostrum improves gut function and NEC resistance relative to infant formula in preterm pigs

Shen, René L., Thymann, Thomas, Østergaard, Mette V., Støy, Ann Cathrine F., Krych, Łukasz, Nielsen, Dennis S., Lauridsen, Charlotte, Hartmann, Bolette, Holst, Jens J., Burrin, Douglas G., Sangild, Pe

Journal:

AJP Gastrointestinal and Liver Physiology

Année:

2015

Langue:

english

Fichier:

PDF, 1.97 MB

english, 2015

8

[Methods in Molecular Biology] Comparative Genomics Volume 1704 ||

Setubal, João C., Stoye, Jens, Stadler, Peter F.

Année:

2018

Langue:

english

Fichier:

PDF, 13.01 MB

english, 2018

9

[Methods in Molecular Biology] Comparative Genomics Volume 1704 || Whole Genome Duplication in Plants: Implications for Evolutionary Analysis

Setubal, João C., Stoye, Jens, Stadler, Peter F.

Année:

2018

Langue:

english

Fichier:

PDF, 2.04 MB

english, 2018

10

[Methods in Molecular Biology] Comparative Genomics Volume 1704 || Genome Rearrangement Analysis: Cut and Join Genome Rearrangements and Gene Cluster Preserving Approaches

Setubal, João C., Stoye, Jens, Stadler, Peter F.

Année:

2018

Langue:

english

Fichier:

PDF, 1003 KB

english, 2018

11

GraphTeams: a method for discovering spatial gene clusters in Hi-C sequencing data

Schulz, Tizian, Stoye, Jens, Doerr, Daniel

Journal:

Année:

2018

Langue:

english

Fichier:

PDF, 1.35 MB

english, 2018

12

Balanced vertices in trees and a simpler algorithm to compute the genomic distance

Péter L. Erdős, Lajos Soukup, Jens Stoye

Journal:

Applied Mathematics Letters

Année:

2011

Langue:

english

Fichier:

PDF, 218 KB

english, 2011

13

The Sequence Analysis and Management System – SAMS-2.0: Data management and sequence analysis adapted to changing requirements from traditional sanger sequencing to ultrafast sequencing technologies

Thomas Bekel, Kolja Henckel, Helge Küster, Folker Meyer, Virginie Mittard Runte, Heiko Neuweger, Daniel Paarmann, Oliver Rupp, Martha Zakrzewski, Alfred Pühler, Jens Stoye, Alexander Goesmann

Journal:

Journal of Biotechnology

Année:

2009

Langue:

english

Fichier:

PDF, 1.92 MB

english, 2009

14

Sequencing of high G + C microbial genomes using the ultrafast pyrosequencing technology

Patrick Schwientek, Rafael Szczepanowski, Christian Rückert, Jens Stoye, Alfred Pühler

Journal:

Journal of Biotechnology

Année:

2011

Langue:

english

Fichier:

PDF, 1.27 MB

english, 2011

15

Character sets of strings

Gilles Didier, Thomas Schmidt, Jens Stoye, Dekel Tsur

Journal:

Journal of Discrete Algorithms

Année:

2007

Langue:

english

Fichier:

PDF, 174 KB

english, 2007

16

Counting suffix arrays and strings

Klaus-Bernd Schürmann, Jens Stoye

Journal:

Theoretical Computer Science

Année:

2008

Langue:

english

Fichier:

PDF, 402 KB

english, 2008

17

A new linear time algorithm to compute the genomic distance via the double cut and join distance

Anne Bergeron, Julia Mixtacki, Jens Stoye

Journal:

Theoretical Computer Science

Année:

2009

Langue:

english

Fichier:

PDF, 932 KB

english, 2009

18

Algorithmic complexity of protein identification: combinatorics of weighted strings

Mark Cieliebak, Thomas Erlebach, Zsuzsanna Lipták, Jens Stoye, Emo Welzl

Journal:

Discrete Applied Mathematics

Année:

2004

Langue:

english

Fichier:

PDF, 319 KB

english, 2004

19

Simple and flexible detection of contiguous repeats using a suffix tree

Jens Stoye, Dan Gusfield

Journal:

Theoretical Computer Science

Année:

2002

Langue:

english

Fichier:

PDF, 150 KB

english, 2002

20

Semen quality and sedentary work position

Julie Støy, Niels Henrik I. Hjøllund, Jens Tølbøll Mortensen, Hermann Burr, Jens Peter Bonde

Journal:

International Journal of Andrology

Année:

2004

Langue:

english

Fichier:

PDF, 117 KB

english, 2004

21

Swiftly Computing Center Strings

Franziska Hufsky, Léon Kuchenbecker, Katharina Jahn, Jens Stoye, Sebastian Böcker

Journal:

BMC Bioinformatics

Année:

2011

Langue:

english

Fichier:

PDF, 498 KB

english, 2011

22

On the weight of indels in genomic distances

Marília D V Braga, Raphael Machado, Leonardo C Ribeiro, Jens Stoye

Journal:

BMC Bioinformatics

Année:

2011

Langue:

english

Fichier:

PDF, 249 KB

english, 2011

23

Genomic distance under gene substitutions

Marília DV Braga, Raphael Machado, Leonardo C Ribeiro, Jens Stoye

Journal:

BMC Bioinformatics

Année:

2011

Langue:

english

Fichier:

PDF, 271 KB

english, 2011

24

Phylogenetic comparative assembly

Peter Husemann, Jens Stoye

Journal:

Algorithms for Molecular Biology

Année:

2010

Langue:

english

Fichier:

PDF, 833 KB

english, 2010

25

An incomplex algorithm for fast suffix array construction

Klaus-Bernd Schürmann, Jens Stoye

Journal:

Software: Practice and Experience

Année:

2007

Langue:

english

Fichier:

PDF, 255 KB

english, 2007

26

Approximative Gencluster und ihre Anwendung in der komparativen Genomik

Katharina Jahn, Jens Stoye

Journal:

Informatik-Spektrum

Année:

2009

Langue:

german

Fichier:

PDF, 825 KB

german, 2009

27

Common Intervals of Multiple Permutations

Steffen Heber, Richard Mayr, Jens Stoye

Journal:

Année:

2011

Langue:

english

Fichier:

PDF, 1.09 MB

english, 2011

28

Partitioning biological data with transitivity clustering

Wittkop, Tobias, Emig, Dorothea, Lange, Sita, Rahmann, Sven, Albrecht, Mario, Morris, John H, Böcker, Sebastian, Stoye, Jens, Baumbach, Jan

Journal:

Année:

2010

Langue:

english

Fichier:

PDF, 195 KB

english, 2010

29

[Lecture Notes in Computer Science] Combinatorial Pattern Matching Volume 7354 || Computing the Burrows-Wheeler Transform of a String and Its Reverse

Kärkkäinen, Juha, Stoye, Jens

Année:

2012

Langue:

english

Fichier:

PDF, 307 KB

english, 2012

30

Stress hormones during flooding therapy and their relationship to therapy outcome in patients with panic disorder and agoraphobia

Anja Siegmund, Luisa Köster, Anna M. Meves, Jens Plag, Meline Stoy, Andreas Ströhle

Journal:

Journal of Psychiatric Research

Année:

2011

Langue:

english

Fichier:

PDF, 377 KB

english, 2011

31

The European Conference on Computational Biology

Steffen Heber, Jens Stoye

Journal:

Drug Discovery Today

Année:

2003

Langue:

english

Fichier:

PDF, 17 KB

english, 2003

32

WebCARMA: a web application for the functional and taxonomic classification of unassembled metagenomic reads

Wolfgang Gerlach, Sebastian Jünemann, Felix Tille, Alexander Goesmann, Jens Stoye

Journal:

BMC Bioinformatics

Année:

2009

Langue:

english

Fichier:

PDF, 753 KB

english, 2009

33

Benchmarking tools for the alignment of functional noncoding DNA

Daniel A Pollard, Casey M Bergman, Jens Stoye, Susan E Celniker, Michael B Eisen

Journal:

BMC Bioinformatics

Année:

2004

Langue:

english

Fichier:

PDF, 576 KB

english, 2004

34

Large scale hierarchical clustering of protein sequences

Antje Krause, Jens Stoye, Martin Vingron

Journal:

BMC Bioinformatics

Année:

2005

Langue:

english

Fichier:

PDF, 353 KB

english, 2005

35

The complete genome sequence ofCorynebacterium pseudotuberculosisFRC41 isolated from a 12-year-old girl with necrotizing lymphadenitis reveals insights into gene-regulatory networks contributing to virulence

Eva Trost, Lisa Ott, Jessica Schneider, Jasmin Schröder, Sebastian Jaenicke, Alexander Goesmann, Peter Husemann, Jens Stoye, Fernanda Alves Dorella, Flavia Souza Rocha, Siomar de Castro Soares, Vívian

Journal:

Année:

2010

Langue:

english

Fichier:

PDF, 2.13 MB

english, 2010

36

Based Upon Repeat Pattern (BURP): an algorithm to characterize the long-term evolution ofStaphylococcus aureuspopulations based onspapolymorphisms

Alexander Mellmann, Thomas Weniger, Christoph Berssenbrügge, Jörg Rothgänger, Michael Sammeth, Jens Stoye, Dag Harmsen

Journal:

BMC Microbiology

Année:

2007

Langue:

english

Fichier:

PDF, 544 KB

english, 2007

37

[Lecture Notes in Computer Science] Combinatorial Pattern Matching Volume 7354 || Efficient Exponential Time Algorithms for Edit Distance between Unordered Trees

Kärkkäinen, Juha, Stoye, Jens

Année:

2012

Langue:

english

Fichier:

PDF, 278 KB

english, 2012

38

A general method for fast multiple sequence alignment

Udo Tönges, Sören W. Perrey, Jens Stoye, Andreas W.M. Dress

Journal:

Année:

1996

Langue:

english

Fichier:

PDF, 944 KB

english, 1996

39

Multiple sequence alignment with the divide-and-conquer method

Journal:

Année:

1998

Langue:

english

Fichier:

PDF, 266 KB

english, 1998

40

[Lecture Notes in Computer Science] Combinatorial Pattern Matching Volume 7354 || Constant-Time Word-Size String Matching

Kärkkäinen, Juha, Stoye, Jens

Année:

2012

Langue:

english

Fichier:

PDF, 294 KB

english, 2012

41

Comparative RNA-sequencing of the acarbose producer Actinoplanes sp. SE50/110 cultivated in different growth media

Schwientek, Patrick, Wendler, Sergej, Neshat, Armin, Eirich, Christina, Rückert, Christian, Klein, Andreas, Wehmeier, Udo F., Kalinowski, Jörn, Stoye, Jens, Pühler, Alfred

Journal:

Journal of Biotechnology

Année:

2013

Langue:

english

Fichier:

PDF, 1.32 MB

english, 2013

42

The complete genome sequence of the acarbose producerActinoplanessp. SE50/110

Schwientek, Patrick, Szczepanowski, Rafael, Ruckert, Christian, Kalinowski, Jorn, Klein, Andreas, Selber, Klaus, Wehmeier, Udo F, Stoye, Jens, Puhler, Alfred

Journal:

Année:

2012

Langue:

english

Fichier:

PDF, 2.01 MB

english, 2012

43

[Lecture Notes in Computer Science] Combinatorial Pattern Matching Volume 7354 || Towards an Optimal Space-and-Query-Time Index for Top-k Document Retrieval

Kärkkäinen, Juha, Stoye, Jens

Année:

2012

Langue:

english

Fichier:

PDF, 247 KB

english, 2012

44

Comparing Tandem Repeats with Duplications and Excisions of Variable Degree

Sammeth, Michael, Stoye, Jens

Journal:

IEEE/ACM Transactions on Computational Biology and Bioinformatics

Année:

2006

Langue:

english

Fichier:

PDF, 1.41 MB

english, 2006

45

metaBEETL: high-throughput analysis of heterogeneous microbial populations from shotgun DNA sequences

Christina Ander, Ole B Schulz-Trieglaff, Jens Stoye, Anthony J Cox

Journal:

BMC Bioinformatics

Année:

2013

Langue:

english

Fichier:

PDF, 364 KB

english, 2013

46

Gene family assignment-free comparative genomics

Daniel Doerr, Annelyse Thévenin, Jens Stoye

Journal:

BMC Bioinformatics

Année:

2012

Langue:

english

Fichier:

PDF, 755 KB

english, 2012

47

Multiple genome comparison based on overlap regions of pairwise local alignments

Katharina Jahn, Henner Sudek, Jens Stoye

Journal:

BMC Bioinformatics

Année:

2012

Langue:

english

Fichier:

PDF, 1.34 MB

english, 2012

48

[Lecture Notes in Computer Science] Algorithms in Bioinformatics Volume 8126 || Computing the Skewness of the Phylogenetic Mean Pairwise Distance in Linear Time

Darling, Aaron, Stoye, Jens

Année:

2013

Langue:

english

Fichier:

PDF, 243 KB

english, 2013

49

[Lecture Notes in Computer Science] Algorithms in Bioinformatics Volume 8126 ||

Darling, Aaron, Stoye, Jens

Année:

2013

Langue:

english

Fichier:

PDF, 11.92 MB

english, 2013

50

MetaSAMS—A novel software platform for taxonomic classification, functional annotation and comparative analysis of metagenome datasets

Zakrzewski, Martha, Bekel, Thomas, Ander, Christina, Pühler, Alfred, Rupp, Oliver, Stoye, Jens, Schlüter, Andreas, Goesmann, Alexander

Journal:

Journal of Biotechnology

Année:

2013

Langue:

english

Fichier:

PDF, 3.22 MB

english, 2013